ungapped
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BLAST — Infobox Software name=BLAST developer=Myers, E., Altschul S.F., Gish W., Miller E.W., Lipman D.J., NCBI latest release version=2.2.18 operating system=UNIX, Linux, Mac, MS Windows genre=Bioinformatics tool license=Public Domain website=… … Wikipedia
Pseudogap — A pseudogap is a term from the field of high temperature superconductivity which describes an energy (normally near the Fermi energy) which has very few states associated with it. This is very similar to a gap , which is an energy that has no… … Wikipedia
Multiple sequence alignment — A multiple sequence alignment (MSA) is a sequence alignment of three or more biological sequences, generally protein, DNA, or RNA. In many cases, the input set of query sequences are assumed to have an evolutionary relationship by which they… … Wikipedia
MaMF — MaMF, or Mammalian Motif Finder, is an algorithm for identifying motifs to which transcription factors bind.The algorithm takes as input a set of promoter sequences, and a motif width(w), and as output, produces a ranked list of 30 predicted… … Wikipedia
